Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
GWL_15140Small multidrug resistance transmembrane protein. (123 aa)    
Predicted Functional Partners:
GWL_15150
undecaprenyl-phosphate-4-amino-L-arabinose-- lipid A 4-amino-L-arabinosyltransferase.
 
  
 0.968
GWL_15090
Xylanase/chitin deacetylase.
 
  
 0.954
GWL_15100
Nucleoside-diphosphate-sugar epimerase.
 
  
 0.825
GWL_15120
Polymixin resistance glycosyltransferase transmembrane protein.
 
  
 0.820
GWL_15130
Pyridoxal phosphate-dependent aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.802
GWL_15110
methionyl-tRNA formyltransferase.
 
  
 0.763
GWL_15160
Hypothetical protein.
       0.728
GWL_30500
UDP-glucose 6-dehydrogenase.
 
  
 0.570
GWL_14660
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
    
   0.511
GWL_05490
Putative glycosyltransferase.
  
  
 0.492
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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