Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_15260Gluconate transporter family protein. (456 aa)    
Predicted Functional Partners:
GWL_04580
Gluconokinase; Belongs to the FGGY kinase family.
 
  
 0.657
GWL_15270
Molybdopterin converting factor large subunit.
       0.583
GWL_14410
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.546
mntH
NRAMP family Mn2+/Fe2+ transporter protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
     
 0.492
GWL_15240
Molybdopterin converting factor small subunit.
       0.491
GWL_15250
SAM-dependent methyltransferase.
       0.491
GWL_15230
Protein of unknown function DUF817.
       0.436
xylB
D-xylulose kinase.
  
  
 0.425
xylB-2
Sugar (pentulose and hexulose) kinase.
  
  
 0.425
GWL_15220
Molybdopterin biosynthesis protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
       0.414
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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