GWL_15530 protein (Herbaspirillum sp. GW103)

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[Homology]

Score

GWL_15530

Membrane-anchored protein. (446 aa)

Predicted Functional Partners:

greB

0.564

GWL_28430

0.515

macB

0.467

GWL_01620

0.401

Your Current Organism:

Herbaspirillum sp. GW103

NCBI taxonomy Id: 1175306
Other names: H. sp. GW103

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GWL_01620	GWL_15530	GWL_01620	GWL_15530	Transcription regulator protein.	Membrane-anchored protein.	0.401
GWL_15530	GWL_01620	GWL_15530	GWL_01620	Membrane-anchored protein.	Transcription regulator protein.	0.401
GWL_15530	GWL_28430	GWL_15530	GWL_28430	Membrane-anchored protein.	Multidrug ABC transporter ATPase/permease.	0.515
GWL_15530	greB	GWL_15530	GWL_15520	Membrane-anchored protein.	Transcription elongation/transcript cleavage factor protein; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	0.564
GWL_15530	macB	GWL_15530	GWL_14740	Membrane-anchored protein.	Antimicrobial peptide ABC transporter ATPase; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.	0.467
GWL_28430	GWL_15530	GWL_28430	GWL_15530	Multidrug ABC transporter ATPase/permease.	Membrane-anchored protein.	0.515
GWL_28430	macB	GWL_28430	GWL_14740	Multidrug ABC transporter ATPase/permease.	Antimicrobial peptide ABC transporter ATPase; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.	0.749
greB	GWL_15530	GWL_15520	GWL_15530	Transcription elongation/transcript cleavage factor protein; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	Membrane-anchored protein.	0.564
macB	GWL_15530	GWL_14740	GWL_15530	Antimicrobial peptide ABC transporter ATPase; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.	Membrane-anchored protein.	0.467
macB	GWL_28430	GWL_14740	GWL_28430	Antimicrobial peptide ABC transporter ATPase; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.	Multidrug ABC transporter ATPase/permease.	0.749