Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GWL_16000Multidrug ABC transporter ATPase/permease. (758 aa)    
Predicted Functional Partners:
GWL_16010
Hypothetical protein.
 
     0.959
GWL_12590
Multidrug ABC transporter ATPase.
   
 0.901
dnaK
Molecular chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.828
GWL_32360
Fe-S cluster assembly ABC transporter permease/ATPase.
    
 0.828
hscA
Molecular chaperone protein; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.
  
 0.814
GWL_42060
ABC transporter ATPase.
 
 
 0.804
GWL_44460
Heat-shock Hsp70 protein.
   
 0.777
GWL_12410
ABC-type bacteriocin/lantibiotic ATPase/permease fusion exporter protein.
   
 0.776
GWL_22330
Bacteriocin/lantibiotic (cyclolysin-type) secretion ABC transporter protein.
   
 0.776
GWL_15970
Cyanophycin synthetase; Belongs to the MurCDEF family.
 
     0.771
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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