Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GWL_16550Stress-induced morphogen protein; Belongs to the BolA/IbaG family. (94 aa)    
Predicted Functional Partners:
GWL_33560
Glutaredoxin protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.985
GWL_16560
Intracellular septation A protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
 
    0.900
GWL_04810
Sulfite reductase, flavoprotein component.
    
 0.864
GWL_11360
Oxidoreductase FAD/NAD(P)-binding:flavodoxin/nitric oxide synthase.
    
 0.864
GWL_35140
BolA family transcriptional regulator; Belongs to the BolA/IbaG family.
 
  
0.816
erpA
Hypothetical protein; Required for insertion of 4Fe-4S clusters.
   
 0.806
GWL_24870
FeS cluster assembly scaffold protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
     
 0.798
msrB
Peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
  
    0.792
GWL_24860
Hypothetical protein; Belongs to the HesB/IscA family.
   
 0.792
cyaY
Iron transport frataxin protein; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.
     
 0.791
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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