Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GWL_16560Intracellular septation A protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. (206 aa)    
Predicted Functional Partners:
GWL_16550
Stress-induced morphogen protein; Belongs to the BolA/IbaG family.
 
    0.900
msrB
Peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
  
    0.845
selO
Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.
       0.655
GWL_01600
Transmembrane protein.
  
     0.625
GWL_16540
Peptidyl-prolyl cis-trans isomerase.
       0.596
GWL_32800
Transmembrane protein.
  
     0.594
secB
Preprotein translocase subunit SecB protein; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
     0.507
thrB
Homoserine kinase; Belongs to the pseudomonas-type ThrB family.
  
     0.487
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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