Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_17170Sugar ABC transporter auxiliary component protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (125 aa)    
Predicted Functional Partners:
rbsK
Sugar kinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 
 0.965
GWL_17110
Sugar ABC transporter periplasmic protein.
 
  
 0.956
GWL_17140
Sugar ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.954
GWL_04240
Sugar ABC transporter periplasmic protein.
 
  
 0.918
GWL_04260
Ribose/xylose/arabinose/galactoside ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.905
GWL_04120
Sugar ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.885
GWL_02380
Sugar ABC transporter periplasmic protein.
 
  
 0.877
GWL_04130
Sugar ABC transporter periplasmic protein.
 
  
 0.865
GWL_17120
Sugar ABC transporter ATPase.
 
  
 0.859
GWL_03930
Sugar ABC transporter periplasmic protein.
 
  
 0.827
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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