Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_17300ArsR family transcriptional regulator. (105 aa)    
Predicted Functional Partners:
GWL_17290
Hypothetical protein.
 
   
 0.863
GWL_17280
Transmembrane protein.
 
   
 0.859
GWL_17270
Hypothetical protein.
       0.613
GWL_10510
Heavy metal translocating P-type ATPase.
  
  
 0.568
GWL_39340
NMN adenylyltransferase/nudix hydrolase.
  
 
  0.501
GWL_17310
Hypothetical protein.
       0.497
GWL_30340
SIR2 family NAD-dependent deacetylase 3 protein.
  
 
 0.472
GWL_03790
Silent information regulator protein Sir2.
  
 
 0.464
GWL_10460
Metal-transporting P-type ATPase transmembrane protein.
  
  
 0.438
GWL_25540
Cation transport P-type ATPase.
  
  
 0.438
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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