Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_17320LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
GWL_17340
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.881
GWL_17330
NADH:ubiquinone oxidoreductase subunit L/Multisubunit Na+/H+ antiporter MnhA subunit.
 
     0.859
GWL_18150
LysR family regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.592
GWL_09100
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.579
GWL_08790
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.572
GWL_07510
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.560
GWL_06870
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.547
GWL_37020
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.528
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.522
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.507
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.