Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GWL_17620Copper resistance C signal peptide protein. (128 aa)    
Predicted Functional Partners:
GWL_17630
Copper resistance D domain protein.
 
  
 0.958
GWL_17610
Copper resistance protein B.
 
   
 0.841
GWL_17460
Hypothetical protein.
 
  
 0.827
GWL_35890
Hypothetical protein.
  
  
 0.822
GWL_17410
Hypothetical protein.
    
   0.648
GWL_38490
BFD-like protein.
    
   0.648
GWL_45120
BFD-like protein (2Fe-2S)-binding protein.
    
   0.648
GWL_17600
Copper resistance protein A.
 
   
 0.637
GWL_25490
Cbb3-type cytochrome c oxidase subunit III transmembrane protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 
 0.567
GWL_38410
Cytochrome c precursor protein.
   
 
 0.567
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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