Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GWL_17630Copper resistance D domain protein. (304 aa)    
Predicted Functional Partners:
GWL_17620
Copper resistance C signal peptide protein.
 
  
 0.958
GWL_17610
Copper resistance protein B.
 
   
 0.808
GWL_17450
Hypothetical protein.
 
  
 0.740
GWL_17600
Copper resistance protein A.
 
   
 0.646
GWL_17640
Hypothetical protein.
       0.488
GWL_17660
Copper transporting ATPase CopA.
     
 0.447
GWL_17580
Sensor kinase of copper sensing two-component system; Member of a two-component regulatory system.
 
     0.413
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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