Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_17740Putative flavoprotein. (240 aa)    
Predicted Functional Partners:
GWL_17730
Arsenate reductase.
 
   
 0.830
GWL_17710
Ars family arsenical pump; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.
  
  
 0.787
GWL_17720
Major facilitator superfamily protein.
       0.776
GWL_04810
Sulfite reductase, flavoprotein component.
     
 0.705
GWL_17700
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.694
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
  
 0.643
GWL_31580
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase.
  
 0.643
GWL_17690
ArsR family transcriptional regulator, ArsR.
 
   
 0.639
GWL_10370
Hypothetical protein.
  
 0.619
GWL_07130
Electron transfer component of chlorobenzoate 1,2-dioxygenase.
     
  0.604
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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