Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GWL_18630Haloacid dehalogenase-like hydrolase protein. (232 aa)    
Predicted Functional Partners:
GWL_18640
Family 5 extracellular solute-binding protein.
 
     0.849
GWL_05000
glycine/D-amino acid oxidase.
 
  
  0.808
GWL_44060
glycine/D-amino acid oxidase.
 
  
  0.807
GWL_05110
glycine/D-amino acid oxidase.
  
  
  0.801
GWL_30070
Bifuntional protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.783
GWL_05020
Histone acetyltransferase HPA2 protein.
 
     0.755
GWL_05050
Dipeptide ABC transporter periplasmic peptide-binding protein.
 
     0.736
GWL_04980
GNAT family acetyltransferase.
 
    0.732
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.721
GWL_05140
NAD-dependent betaine aldehyde dehydrogenase.
     
  0.715
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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