Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_18660Cytochrome c family protein. (773 aa)    
Predicted Functional Partners:
GWL_35790
Cytochrome c oxidase polypeptide II precursor transmembrane protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.996
GWL_38410
Cytochrome c precursor protein.
 
0.991
GWL_25490
Cbb3-type cytochrome c oxidase subunit III transmembrane protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.990
GWL_34940
Transmembrane ubiquinol-cytochrome C reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.990
msrP
Sulfite oxidase; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) dia [...]
   
 0.986
GWL_34930
Cytochrome b subunit transmembrane protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.986
GWL_18930
Cytochrome o ubiquinol oxidase subunit III protein.
  
 0.980
GWL_35750
Cytochrome c oxidase subunit III transmembrane protein.
  
 0.980
GWL_25520
Cbb3-type cytochrome c oxidase subunit I transmembrane protein; Belongs to the heme-copper respiratory oxidase family.
 
 0.976
GWL_25510
Cbb3-type cytochrome c oxidase subunit II transmembrane protein.
  
 0.975
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
Server load: medium (48%) [HD]