Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_18870Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (630 aa)    
Predicted Functional Partners:
GWL_31510
Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.992
GWL_18860
Branched-chain amino acid ABC transporter ATPase.
 
 
 0.989
GWL_18850
Branched-chain amino acid ABC transporter ATPase.
 
 
 0.982
GWL_18880
Branched-chain amino acid ABC transporter periplasmic protein.
 
 
 0.982
GWL_10660
Branched-chain amino acid ABC transporter periplasmic protein.
 
 
 0.958
GWL_12260
Branched-chain amino acid ABC transporter ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.956
GWL_07400
Amino acid ABC transporter composite ATP-binding protein/permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.950
GWL_33960
Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.950
GWL_35380
Branched-chain amino acid ABC transporter ATP-binding protein/permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.950
GWL_17510
TonB-dependent siderophore receptor; Overlaps another CDS with the same product name.
  
    0.909
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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