Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_19220Metal-dependent hydrolase. (265 aa)    
Predicted Functional Partners:
GWL_19210
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
 
 
 0.974
clsB
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
 
 
  0.900
GWL_04800
Phospholipase D family protein; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
 
 
  0.640
GWL_20050
Sphingosine kinase/eukaryotic diacylglycerol kinase.
  
 
  0.637
GWL_27020
Phospholipase A1 protein; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
  
  
 0.572
GWL_19560
Malto-oligosyl trehalose synthase.
 
  
  0.562
GWL_19580
Malto-oligosyltrehalose trehalohydrolase.
 
 
  0.561
GWL_19590
Glycogen debranching enzyme protein; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.538
GWL_19570
4-alpha-glucanotransferase.
  
 
 0.509
GWL_05770
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
  
 
  0.503
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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