Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_19530Hypothetical protein. (417 aa)    
Predicted Functional Partners:
GWL_27960
Two component hybrid sensor histidine kinase/response regulator protein.
    
 0.889
GWL_14980
TPR repeat containing protein.
  
 0.823
GWL_35660
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.783
GWL_01620
Transcription regulator protein.
 
 
  0.758
GWL_35650
Cell division ATPase.
   
 
 0.752
GWL_02480
N-acetylmuramoyl-l-alanine amidase.
   
 
 0.719
GWL_19410
Two component hybrid sensor histidine kinase/response regulator protein.
    
  0.688
GWL_23610
Methyltransferase of chemotaxis protein.
 
 
 0.681
GWL_32950
TPR repeat containing protein.
  
 
 0.675
GWL_12560
Histidine-containing phosphotransfer (HPt) domain-containing protein.
    
  0.667
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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