Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glgB1,4-alpha-glucan branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (761 aa)    
Predicted Functional Partners:
GWL_19590
Glycogen debranching enzyme protein; Belongs to the glycosyl hydrolase 13 family.
 
 
0.998
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.998
GWL_19570
4-alpha-glucanotransferase.
 
 0.997
GWL_19560
Malto-oligosyl trehalose synthase.
 
 
 0.980
GWL_21260
Phosphoglucomutase.
 
 0.953
GWL_19580
Malto-oligosyltrehalose trehalohydrolase.
 
 
0.922
GWL_03020
Putative glycocyl transferase/mannosyl transferase protein.
   
 0.908
GWL_43800
Trehalose-6-phosphate phophatase, biosynthetic; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 0.886
GWL_14980
TPR repeat containing protein.
  
 0.858
GWL_06670
Glycosyltransferase.
   
 0.831
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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