Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_19710Hypothetical protein. (94 aa)    
Predicted Functional Partners:
GWL_19700
GCN5-like N-acetyltransferase.
 
     0.956
GWL_04980
GNAT family acetyltransferase.
   
 
 0.741
GWL_11490
Histone acetyltransferase HPA2 protein.
   
 
 0.741
GWL_15720
Acyltransferase.
   
 
 0.741
GWL_22150
GNAT family acetyltransferase.
   
 
 0.741
GWL_22560
Acetyltransferase domain-containing protein.
   
 
 0.741
GWL_46080
GNAT family acetyltransferase.
   
 
 0.741
GWL_03000
Histone acetyltransferase HPA2.
   
   0.644
GWL_05020
Histone acetyltransferase HPA2 protein.
   
   0.644
GWL_14130
Acetyltransferase.
   
   0.644
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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