Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_20310Amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (358 aa)    
Predicted Functional Partners:
GWL_20330
Amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
GWL_20300
Amino acid ABC transporter periplasmic protein.
 
 
 0.957
GWL_20290
Amino acid ABC transporter ATPase.
 
 
 0.953
GWL_20340
Amino acid ABC transporter ATPase.
 
 0.946
GWL_20280
phenylacetyl-CoA-ligase.
 
    0.878
GWL_20350
Long-chain acyl-CoA synthetase.
 
    0.852
GWL_31520
Branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.822
GWL_31510
Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.820
GWL_05870
Branched-chain amino acid ABC transporter ATPase.
 
 0.778
GWL_43590
Branched-chain amino acid ABC transporter ATPase.
 
 0.778
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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