Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_20610Phytoene synthase. (277 aa)    
Predicted Functional Partners:
GWL_20620
Squalene/phytoene dehydrogenase, carotene 7,8-desaturase.
 
 0.982
GWL_32060
Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
 0.966
GWL_45210
Octaprenyldiphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.955
GWL_16090
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
     
 0.896
GWL_27350
Nucleoside-diphosphate-sugar epimerase.
 
 0.834
GWL_03780
UDP-glucose 4-epimerase.
  
 0.813
GWL_06170
NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase.
  
 0.813
GWL_15100
Nucleoside-diphosphate-sugar epimerase.
  
 0.813
GWL_24040
Nucleoside-diphosphate-sugar epimerase.
  
 0.813
GWL_27860
Nucleoside-diphosphate-sugar epimerase.
  
 0.813
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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