Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
phnXPhosphonoacetaldehyde phosphonohydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family. (275 aa)    
Predicted Functional Partners:
GWL_16400
Secreted glycine/D-amino acid oxidase.
 
  
  0.965
GWL_16420
Fe3+ ABC transporter permease.
 
     0.782
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.779
GWL_20840
Glycerol kinase; Belongs to the FGGY kinase family.
   
 0.742
GWL_16410
Fe3+ ABC transporter periplasmic protein.
 
   
 0.740
GWL_32840
Oxidoreductase.
    
  0.678
trmB
tRNA guanine-N(7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
    
  0.644
GWL_42360
Methyl transferase.
    
  0.644
GWL_20810
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
 
     0.632
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
    
 0.606
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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