Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_20880Hypothetical protein. (290 aa)    
Predicted Functional Partners:
GWL_20590
Signal transduction protein.
  
     0.750
GWL_14560
Antiactivator of flagellar biosynthesis FleN protein.
 
     0.632
GWL_31040
Two component hybrid sensor histidine kinase/response regulator protein.
 
 
 
 0.600
GWL_27960
Two component hybrid sensor histidine kinase/response regulator protein.
   
 0.570
GWL_19410
Two component hybrid sensor histidine kinase/response regulator protein.
   
  0.569
GWL_41180
Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.556
GWL_15640
Signal transduction containing EAL and modified HD-GYP domains protein.
  
     0.555
GWL_16930
Two component response regulator protein.
 
  
 
0.537
GWL_06490
Regulator of the two-component system protein.
 
  
 
0.533
GWL_20860
Poly(3-hydroxyalkanoate) synthetase.
       0.528
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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