Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_21180Ferredoxin protein. (113 aa)    
Predicted Functional Partners:
GWL_21140
precorrin-8X methylmutase.
 
  
 0.959
GWL_21120
Precorrin-2 C20-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A.
 
  
  0.938
GWL_21150
Precorrin-6y methylase methyltransferase.
 
     0.938
GWL_09300
NAD-dependent formate dehydrogenase subunit alpha.
  
 0.923
GWL_21090
Precorrin-3 methyltransferase/precorrin-6x reductase oxidoreductase.
 
   
 0.919
GWL_21100
precorrin-3B C17-methyltransferase/precorrin isomerase.
 
   
 0.910
GWL_21170
Cobalamin biosynthesis protein.
 
  
  0.907
cbiD
Cobalamin biosynthesis CbiD transmembrane protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
   
 0.893
GWL_33020
Glutamate synthase small subunit oxidoreductase.
   
 0.892
GWL_21160
Mg-chelatase subunit ChlI protein.
 
     0.860
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.