Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_24130enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (267 aa)    
Predicted Functional Partners:
GWL_40520
hydroxymethylglutaryl-CoA lyase.
 
 0.994
GWL_40480
acetyl/propionyl-CoA carboxylase subunit beta.
 
 
 0.964
GWL_40490
acetyl/propionyl-CoA carboxylase subunit alpha.
 0.926
GWL_27960
Two component hybrid sensor histidine kinase/response regulator protein.
   
 0.913
GWL_31040
Two component hybrid sensor histidine kinase/response regulator protein.
  
 0.909
GWL_12560
Histidine-containing phosphotransfer (HPt) domain-containing protein.
   
 0.908
GWL_24770
Sensor histidine kinase.
   
 0.882
GWL_06510
Hpt sensor hybrid histidine kinase.
   
 0.881
GWL_30250
Hypothetical protein.
   
 0.881
GWL_30950
Hypothetical protein.
   
 0.881
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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