Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_25420Fatty acid desaturase. (356 aa)    
Predicted Functional Partners:
GWL_04350
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein.
  
 
 0.875
GWL_07260
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 protein.
  
 
 0.837
GWL_33740
Vanillate O-demethylase (vanillate degradation ferredoxin-like) oxidoreductase.
  
 
 0.837
GWL_35480
Phenylacetic acid degradation NADH oxidoreductase.
  
 
 0.837
GWL_46180
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 protein.
  
 
 0.837
GWL_07130
Electron transfer component of chlorobenzoate 1,2-dioxygenase.
  
 
 0.774
GWL_27360
Chaperone activity ATPase.
  
 
 0.774
GWL_30180
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase.
  
 
 0.774
GWL_05790
stearoyl-CoA desaturase oxidoreductase.
  
 0.763
GWL_18790
Cytochrome P450 monooxygenase.
 
  
 0.712
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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