Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_25500Hypothetical protein. (64 aa)    
Predicted Functional Partners:
GWL_25490
Cbb3-type cytochrome c oxidase subunit III transmembrane protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.998
GWL_25510
Cbb3-type cytochrome c oxidase subunit II transmembrane protein.
  
 
 0.998
GWL_25520
Cbb3-type cytochrome c oxidase subunit I transmembrane protein; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.998
GWL_35790
Cytochrome c oxidase polypeptide II precursor transmembrane protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.968
GWL_38410
Cytochrome c precursor protein.
  
 0.961
GWL_35750
Cytochrome c oxidase subunit III transmembrane protein.
     
 0.880
GWL_35780
Cytochrome c oxidase polypeptide I transmembrane protein; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
     
  0.876
GWL_25470
Iron-sulfur 4Fe-4S ferredoxin transmembrane protein.
  
  
 0.811
GWL_07920
Cytochrome c protein.
  
 0.806
GWL_18660
Cytochrome c family protein.
  
 0.806
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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