Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_26250Histidine ammonia-lyase. (542 aa)    
Predicted Functional Partners:
GWL_43870
Prolidase.
  
  
 0.836
GWL_30740
Histidine ammonia-lyase.
  
  
 
0.784
hisD
Histidinol dehydrogenase oxidoreductase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
 0.762
GWL_30580
Chorismate mutase/prephenate dehydratase.
     
 0.733
GWL_28420
Hypothetical protein.
     
  0.715
GWL_26260
Hypothetical protein.
       0.675
GWL_17050
Formiminoglutamate deiminase.
 
  
 0.662
GWL_17060
N-formylglutamate amidohydrolase.
 
  
 0.634
GWL_11480
Arginase/agmatinase/formimionoglutamate hydrolase; Belongs to the arginase family.
 
  
 0.616
GWL_18480
Hypothetical protein.
    
 0.609
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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