Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
GWL_26400Glyoxylate carboligase; Belongs to the TPP enzyme family. (591 aa)    
Predicted Functional Partners:
GWL_26380
2-hydroxy-3-oxopropionate reductase.
 
 
 0.992
GWL_26390
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
 
 0.988
GWL_11680
Acetolactate synthase isozyme III large subunit.
  
  
 
0.960
GWL_31960
Glycolate oxidase iron-sulfur subunit oxidoreductase.
     
 0.937
GWL_36210
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
 
 0.916
GWL_23700
Malate synthase; Belongs to the malate synthase family.
    
 0.905
GWL_15420
Isocitrate lyase.
     
 0.892
GWL_04670
2-keto-4-hydroxyglutarate aldolase/-keto-3-deoxy-6-phosphogluconate aldolase.
     
 0.880
GWL_31970
Glycolate oxidase iron-sulfur subunit oxidoreductase.
     
  0.876
GWL_36250
6-phosphogluconate dehydrogenase.
 
 
 0.862
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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