Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_27290Na+(K+)/H+ antiporter protein; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (560 aa)    
Predicted Functional Partners:
GWL_27840
Mg(2+) transport ATPase.
   
 0.928
atpE
F0F1-type ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 0.809
GWL_14220
Exopolysaccharide methanolan synthase.
   
 
 0.775
GWL_20240
Poly(3-hydroxybutyrate) depolymerase.
   
 0.735
smc
Chromosome segregation SMC ATPase; Required for chromosome condensation and partitioning. Belongs to the SMC family.
    
 0.699
GWL_17390
Integrase-like protein.
    
 0.699
GWL_17670
Integrase-like protein.
    
 0.699
GWL_18600
Putative transport permease.
    
  0.697
GWL_20040
Type 2 phosphatidic acid phosphatase family protein.
    
  0.697
GWL_14150
Hypothetical protein.
    
  0.695
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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