Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GWL_27500Sugar ABC transporter permease. (293 aa)    
Predicted Functional Partners:
GWL_27490
Sugar ABC transporter permease.
 0.992
GWL_27480
Sugar ABC transporter periplasmic protein.
 
 0.978
GWL_27470
Sugar ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
 0.976
GWL_28130
Sugar ABC transporter permease.
 
 0.967
ugpC
Sn-glycerol-3-phosphate ABC transporter ATPase; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 0.964
GWL_28160
Sugar ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
 0.963
GWL_44180
Sugar ABC transporter permease.
 
 0.963
GWL_44210
Maltose/maltodextrin ABC transporter ATPase.
 
 0.963
GWL_24300
Sugar ABC transporter permease.
 
 0.962
GWL_24280
Sugar ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
 0.955
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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