Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_27670Lipoprotein; Overlaps another CDS with the same product name. (123 aa)    
Predicted Functional Partners:
GWL_27680
Lipoprotein; Overlaps another CDS with the same product name.
 
  
 0.991
GWL_27660
Curli polymers formation protein.
 
    0.987
GWL_06860
Hypothetical protein.
  
     0.572
GWL_39610
Hypothetical protein.
  
     0.551
GWL_08630
Transcription regulator protein.
  
     0.509
GWL_34040
Hypothetical protein.
  
     0.490
GWL_34610
Bacteriophage endolysin.
  
     0.457
GWL_01530
Hypothetical protein.
  
     0.456
GWL_18230
Putative bacteriophage endolysin protein.
  
     0.438
GWL_36170
Hypothetical protein.
  
     0.428
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.