Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GWL_27790Glycine rich transmembrane protein. (297 aa)    
Predicted Functional Partners:
GWL_27780
Lipoprotein.
 
  
 0.971
GWL_27800
Membrane protein.
 
     0.964
GWL_35790
Cytochrome c oxidase polypeptide II precursor transmembrane protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
   0.890
GWL_34930
Cytochrome b subunit transmembrane protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
   0.785
GWL_18940
Cytochrome o ubiquinol oxidase subunit I protein; Belongs to the heme-copper respiratory oxidase family.
    
   0.733
GWL_35780
Cytochrome c oxidase polypeptide I transmembrane protein; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
    
   0.733
GWL_18950
Cytochrome o ubiquinol oxidase subunit II protein.
    
   0.727
GWL_18930
Cytochrome o ubiquinol oxidase subunit III protein.
    
   0.695
GWL_35750
Cytochrome c oxidase subunit III transmembrane protein.
    
   0.695
GWL_14820
Flagellar transmembrane protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
   0.662
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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