Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
GWL_28060Nitrate/sulfonate/bicarbonate ABC transporter ATPase. (275 aa)    
Predicted Functional Partners:
GWL_28050
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
 0.994
GWL_30390
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
 0.984
GWL_19880
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
 0.980
GWL_30410
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein.
 
 0.976
GWL_10890
Alkanesulfonates ABC transporter permease.
 
 0.971
GWL_28070
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein.
 
 0.953
GWL_28080
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein.
 
 0.943
GWL_10860
NAD(P)H-dependent FMN reductase.
  
 
 0.926
GWL_31360
ABC transporter permease protein.
 
  0.913
GWL_09370
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
 0.912
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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