Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
GWL_28080Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein. (351 aa)    
Predicted Functional Partners:
GWL_28070
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein.
 
  
 
0.956
GWL_28050
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
  0.945
GWL_28060
Nitrate/sulfonate/bicarbonate ABC transporter ATPase.
 
 0.943
GWL_30390
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
  0.899
GWL_30400
Nitrate/sulfonate/bicarbonate ABC transporter ATPase.
 
 0.891
GWL_19880
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
  0.776
GWL_19870
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein.
  
  
  0.759
GWL_19890
Nitrate/sulfonate/bicarbonate ABC transporter ATPase.
 
 0.752
GWL_31360
ABC transporter permease protein.
 
 0.752
GWL_00520
Nitrate/sulfonate/bicarbonate ABC transporter ATPase/permease.
 
  0.739
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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