Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
GWL_28440NADH:flavin oxidoreductase. (379 aa)    
Predicted Functional Partners:
GWL_33030
Glutamate synthase large subunit oxidoreductase.
    
 0.901
GWL_09520
Electron transfer flavoprotein subunit beta.
  
 0.818
GWL_09530
Electron transfer flavoprotein subunit alpha.
   
 0.781
GWL_09940
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.772
GWL_04350
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein.
  
 
 0.610
GWL_07260
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 protein.
    
 0.607
GWL_33740
Vanillate O-demethylase (vanillate degradation ferredoxin-like) oxidoreductase.
    
 0.607
GWL_35480
Phenylacetic acid degradation NADH oxidoreductase.
    
 0.607
GWL_46180
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 protein.
    
 0.607
GWL_02840
Acetyl-coenzyme A synthetase.
  
 
 0.583
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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