Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_28670HlyD family type I secretion membrane fusion protein. (74 aa)    
Predicted Functional Partners:
GWL_22330
Bacteriocin/lantibiotic (cyclolysin-type) secretion ABC transporter protein.
 
 0.978
GWL_12410
ABC-type bacteriocin/lantibiotic ATPase/permease fusion exporter protein.
 
 0.947
GWL_28680
Hypothetical protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
 
 0.899
GWL_28660
Hypothetical protein.
 
   
 0.880
GWL_12370
Outer membrane protein.
 
 0.824
macB
Antimicrobial peptide ABC transporter ATPase; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.784
GWL_22310
Outer membrane channel lipoprotein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
  
 0.774
GWL_23840
Outer membrane efflux protein.
  
 0.763
GWL_20550
Hemolysin-type calcium binding protein.
 
   
 0.758
GWL_00010
Drug efflux lipoprotein.
  
 0.754
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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