Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
GWL_29340TPR repeat-containing protein. (603 aa)    
Predicted Functional Partners:
GWL_14980
TPR repeat containing protein.
 
 
0.925
GWL_20640
Ankyrin repeat-containing signal peptide protein.
 
 0.899
htpG
HSP90 family high temperature molecular chaperone G protein; Molecular chaperone. Has ATPase activity.
  
 0.867
dnaJ
Molecular chaperone protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between Dn [...]
    
 0.862
GWL_20240
Poly(3-hydroxybutyrate) depolymerase.
   
 0.861
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.857
GWL_32950
TPR repeat containing protein.
  
 0.849
GWL_27960
Two component hybrid sensor histidine kinase/response regulator protein.
   
 0.835
GWL_10710
FKBP-type peptidyl-prolyl cis-trans isomerase.
    
 0.822
dnaK
Molecular chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.812
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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