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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_30180CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase. (357 aa)    
Predicted Functional Partners:
GWL_33020
Glutamate synthase small subunit oxidoreductase.
   
 0.978
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.969
GWL_04810
Sulfite reductase, flavoprotein component.
   
 0.960
GWL_30190
Anthranilate dioxygenase small subunit.
  
 
 0.959
GWL_32840
Oxidoreductase.
 
 0.958
GWL_04350
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein.
 
 
 0.951
ribB
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.946
GWL_07130
Electron transfer component of chlorobenzoate 1,2-dioxygenase.
 
 
0.945
GWL_30200
Anthranilate dioxygenase large subunit.
 
 
 0.934
GWL_27360
Chaperone activity ATPase.
  
 
 0.931
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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