Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_31530ABC superfamily ATP binding cassette transporter, binding protein. (394 aa)    
Predicted Functional Partners:
GWL_31510
Inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.990
GWL_31520
Branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.953
GWL_12260
Branched-chain amino acid ABC transporter ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.885
GWL_18870
Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.870
GWL_12250
Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.869
GWL_22750
Amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.840
GWL_30160
Amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.837
GWL_30150
Amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.833
GWL_22740
Amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.821
GWL_05370
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.795
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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