Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
GWL_32000D-lactate dehydrogenase. (458 aa)    
Predicted Functional Partners:
GWL_20630
L-lactate dehydrogenase.
  
 0.942
GWL_31960
Glycolate oxidase iron-sulfur subunit oxidoreductase.
 
 
 0.915
GWL_31970
Glycolate oxidase iron-sulfur subunit oxidoreductase.
 
0.911
GWL_16830
Pyruvate dehydrogenase; Belongs to the TPP enzyme family.
   
 0.900
GWL_27720
NADP-dependent malic enzyme oxidoreductase.
  
 
 0.899
GWL_05430
NADP-dependent malic enzyme oxidoreductase.
  
 
 0.898
GWL_11680
Acetolactate synthase isozyme III large subunit.
   
 0.897
GWL_16240
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
    
 0.886
GWL_01800
Pyruvate kinase II protein; Belongs to the pyruvate kinase family.
    
 0.885
GWL_08740
Pyruvate dehydrogenase E1 component protein; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
     
 0.880
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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