Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GWL_32300Glutamate/aspartate ABC transporter permease. (231 aa)    
Predicted Functional Partners:
GWL_32310
Glutamate/aspartate ABC transporter permease.
 
 
 
0.996
GWL_32290
Glutamate/aspartate ABC transporter ATPase.
 
 0.994
GWL_32320
Glutamate/aspartate ABC transporter periplasmic protein.
 
 0.987
GWL_17030
Glutamine ABC transporter ATPase.
 
 0.969
GWL_42340
Glutamine ABC transporter ATPase.
 
 0.964
GWL_05600
Amino acid ABC transporter ATPase.
 
 0.963
GWL_09480
Amino acid ABC transporter ATPase.
 
 0.962
GWL_18120
Putative amino acid ABC transporter ATP-binding protein.
 
 0.962
GWL_08850
ABC polar amino acid transporter, ATPase subunit.
 
 0.960
cysA
Sulfate/molybdate ABC transporter ATPase; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
     
 0.958
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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