Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
GWL_32600Fumarylacetoacetate hydrolase family protein. (391 aa)    
Predicted Functional Partners:
GWL_32610
Short-chain alcohol dehydrogenase.
 
  
  0.844
GWL_04010
Dehydrogenase oxidoreductase.
  
  
  0.810
GWL_32620
Gluconolactonase.
 
  
 0.810
GWL_11210
Gluconolactonase.
 
  
 0.804
GWL_32590
Altronate hydrolase.
 
   
 0.758
GWL_38610
Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.750
GWL_32530
Hypothetical protein.
 
     0.733
GWL_38230
Gluconolactonase.
 
  
 0.715
GWL_04050
Gluconolactonase.
 
  
 0.670
GWL_43260
NAD-dependent dehydrogenase.
 
  
 0.643
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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