Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GWL_32660Universal stress protein. (145 aa)    
Predicted Functional Partners:
GWL_08570
Exoribonuclease BN transmembrane protein.
   
  
 0.511
GWL_02580
methylated-DNA-protein-cysteine S-methyltransferase.
  
  
 0.503
GWL_42290
methylated-DNA-protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
  
  
 0.503
GWL_32650
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.483
GWL_19410
Two component hybrid sensor histidine kinase/response regulator protein.
 
   
 0.479
GWL_03220
Alcohol dehydrogenase.
  
 
 0.471
GWL_33550
Ribosome hibernation protein YhbH.
   
  
 0.464
dksA
DnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
  
  
 0.435
GWL_11110
O6-methylguanine-DNA methyltransferase.
  
  
 0.429
GWL_01860
Outer membrane W protein.
  
  
 0.414
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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