Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GWL_33480Hypothetical protein. (49 aa)    
Predicted Functional Partners:
GWL_33470
Glutathione-regulated potassium-efflux system K+/H+ antiporter transmembrane protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
       0.732
GWL_33490
Sugar phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
       0.497
GWL_33500
Low-specificity phosphatase.
       0.497
GWL_33510
Transmembrane protein.
       0.497
GWL_33460
Methyl-accepting chemotaxis I MCP-I serine chemoreceptor transmembrane protein.
       0.417
lptA
Signal peptide protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane.
       0.404
GWL_33530
ABC transporter ATPase.
       0.404
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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