Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_35520phenylacetyl-CoA-ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (446 aa)    
Predicted Functional Partners:
GWL_35510
Phenylacetic acid degradation protein.
 
 
 0.991
GWL_35480
Phenylacetic acid degradation NADH oxidoreductase.
 
 
 0.984
GWL_35470
Phenylacetic acid degradation protein; Overlaps another CDS with the same product name.
 
  
 0.973
GWL_35440
Phenylacetic acid degradation protein.
 
 
 0.972
GWL_35450
Phenylacetic acid degradation protein.
 
 
 0.972
GWL_35460
Phenylacetic acid degradation protein; Overlaps another CDS with the same product name.
 
 
 0.972
GWL_07530
Amidase family protein.
    
  0.880
amiE
Aliphatic amidase; Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates.
     
  0.875
GWL_33330
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.861
GWL_35400
Ring-opening enzyme protein.
 
 
 0.834
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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