Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
GWL_36420Xylanase/chitin deacetylase. (310 aa)    
Predicted Functional Partners:
GWL_26300
OHCU decarboxylase/N-carbamoyl-L-amino acid amidohydrolase.
  
 0.982
GWL_39030
N-carbamoyl-L-amino acid amidohydrolase.
 
  
 0.952
GWL_26200
Transthyreretyn-like protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 
  0.934
GWL_36410
Hydantoin racemase.
 
  
  0.931
GWL_08780
Asp/Glu racemase.
 
  
  0.817
GWL_26260
Hypothetical protein.
 
    0.797
GWL_36430
Transmembrane protein.
 
    0.792
GWL_46290
Dihydroorotase.
    
  0.787
GWL_26470
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
   
 0.747
GWL_26460
xanthine/CO dehydrogenase maturation protein.
 
     0.740
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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