Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_36620Indolepyruvate ferredoxin oxidoreductase subunit alpha/beta. (1197 aa)    
Predicted Functional Partners:
GWL_33020
Glutamate synthase small subunit oxidoreductase.
   
 0.978
GWL_09300
NAD-dependent formate dehydrogenase subunit alpha.
   
 0.975
GWL_20160
Indolepyruvate ferredoxin oxidoreductase subunit alpha/beta.
  
 0.973
GWL_23150
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.973
GWL_10650
Ferredoxin protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 0.972
GWL_05430
NADP-dependent malic enzyme oxidoreductase.
    
 0.945
GWL_27720
NADP-dependent malic enzyme oxidoreductase.
    
 0.945
GWL_32840
Oxidoreductase.
    
 0.939
GWL_33030
Glutamate synthase large subunit oxidoreductase.
    
 0.933
GWL_08760
2-oxoglutarate dehydrogenase E3 component lipoamide dehydrogenase.
    
 0.926
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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