Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GWL_38090LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (332 aa)    
Predicted Functional Partners:
GWL_22160
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.771
GWL_42120
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.748
GWL_12530
Transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
   
 0.732
GWL_10290
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.702
GWL_43880
Transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.700
GWL_41520
Transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.690
GWL_19980
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.657
GWL_04780
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.651
GWL_00230
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.638
GWL_20750
LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.632
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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