Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GWL_38370Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein. (358 aa)    
Predicted Functional Partners:
GWL_38350
Nitrate/sulfonate/bicarbonate ABC transporter permease.
 
 0.928
GWL_38330
Nitrate/sulfonate/bicarbonate ABC transporter ATPase.
 
  
 0.870
GWL_10860
NAD(P)H-dependent FMN reductase.
  
 
 0.827
GWL_09370
Nitrate/sulfonate/bicarbonate ABC transporter permease.
  
 0.819
GWL_19880
Nitrate/sulfonate/bicarbonate ABC transporter permease.
  
 0.812
GWL_38320
Hypothetical protein.
 
     0.776
GWL_08230
Binding-protein-dependent transport systems inner membrane component.
  
 0.773
GWL_10890
Alkanesulfonates ABC transporter permease.
  
 0.773
GWL_38310
Hypothetical protein.
 
     0.773
GWL_08260
Amidase family protein.
 
     0.764
Your Current Organism:
Herbaspirillum sp. GW103
NCBI taxonomy Id: 1175306
Other names: H. sp. GW103
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